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Software supporting iFDOs#

A collection of software supporting the iFDO standard. If you want to add your tool to the collection, create an issue at GitLab.

Software-Libraries#

Name Description License iFDO Version
ifdo-py A Python library for parsing and serialising iFDOs. MIT v2.2.1
ifdo-rs A Rust library for parsing, serialising and validating iFDOs. BSD v2.2.0
marIQT A Python library for image quality control/assurance and curation. GPLv3 v2.1.0

iFDO Factories#

Name Description License iFDO Version
marimba A Python framework for structuring, processing, packaging and distributing FAIR scientific image datasets. BSD/MIT v2.2.1
iFDO Creator A GUI driven web- and desktop-application for creating and editing iFDOs. BSD v2.2.0
marIQT A Python jupyter notebook collection to run (image) data curration processes. GNU v2.1.0

Annotation Tools#

Name Description License iFDO Version
BIIGLE BIIGLE is a web service for the efficient and rapid annotation of still images and videos. MIT v2.1.0